Internship and thesis proposals
Transport and extreme statistics for bacterial ecology, a controlled system: magnetotactic bacteria in porous media

Domaines
Statistical physics
Biophysics
Soft matter
Physics of living systems
Non-equilibrium Statistical Physics
Hydrodynamics/Turbulence/Fluid mechanics

Type of internship
Expérimental et théorique
Description
Magnetotactic bacteria (MTB) navigate along Earth’s magnetic field. We hypothesize that magnetic alignment modulates dispersion in sediments, thereby promoting MTB biodiversity in heterogeneous environments. We will recast microbial colonization as a problem in extreme-value statistical physics: the key quantity is not the mean, but the arrival of the first bacterium that seeds a colony. Experimentally, we will quantify transport and rare-event statistics by combining microfluidic sediment analogs, optical tracking, and magnetically controlled flow/field conditions, supported by a complete microfluidic platform (microfabrication and microscopy). Theoretically, we have developed a full simulation pipeline. Together, these approaches will link heterogeneities in pores, flows, and bacterial traits to population-level dispersion and segregation.

Contact
Jean-François Rupprecht
0682494489


Email
Laboratory : Centre de Physique Théorique - UMR 7332
Team : Rupprecht Jean-François
Team Website
/ Thesis :    Funding :